Browse of TCMCG023C07033 protein

CDS

Accession Number	TCMCG023C07033
gbkey	CDS
Protein Id	PIN20215.1
Location	complement(join(116391..116498,116580..116663,116857..117087,117183..117338,117458..117554,117821..117997,118123..118481,118885..118983,119412..119595,119662..119807,120700..120757,120790..121405,122408..122558,122678..122752,122899..123052,123189..123289,123416..123468,123557..123725,124184..124285,124370..124444,124537..124617,124801..124907,125279..125344,125495..125640,126109..126243,126363..126499,127387..127461,127582..127767,128352..128474,128561..128674,128947..129039,129405..129476,129567..129689,129781..129899,130407..130506,131227..131400,131583..131726,132041..132252,132649..132811))
Organism	Handroanthus impetiginosus
locus_tag	CDL12_07113

Protein

Length	1854aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA324125, BioSample:SAMN05195323
db_source	NKXS01001160.1
Definition	rRNA processing protein Rrp5 [Handroanthus impetiginosus]
Locus_tag	CDL12_07113

EGGNOG-MAPPER Annotation

COG_category	A
Description	Suppressor of forked protein (Suf)
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCACCGCCTTCAAAGAAATCTAAATCGAAACCAAACTTGAAATACCTTCAACGGTCACCAACGAAACGTGCTAAATCCAAAGAAAGCCACCCCTACGGCGCCGTTTCGTCGTTGAAATTGCCTCTTCAGGTGGAAGACGATGTTCCCGACTTCCCCCGAGGTGGGAGGAGTTTGTTAAGTAGAGAAGAGAGAAATGAAGTAATGGCTGTAGCAGACAAGGGGTTTGAGGCAGACCAGAGAGTGTTGAAGAAAAGAAAGAAAGAAAAGAGGGTGCAAAACCGGAATCAGTCTGCAGAGGATGATTTGGGTTCGCTCTTTGGGGATGGAACTATGGGGAAATTGCCAAGGTTTGCAAATAAGATCACTCTAACGAATGTTTCATCGGGGATGAAGCTATGGGGTGTCATTGCTGAAGTCAATGAGAAAGATATTGTGGTTAGTCTTCCCGGCGGATTAAGGGGACTAGTTCGTGCATGTGACGCATTTGATCCTATTTTGGATGATGAAGTAAAAGGGGATGTGGAGAGTAGATACCTTTCCAGAATATATCATGTAGGGCAGCTTGTCTCTTGCGTTGTGTTGCAAGTTGATGATGATAGAAAAGAAATAGCAAAAAGAAAGATCTGGCTTTCTCTCCGCCTGTCTTTATTACACAAGAGCTTGACACTTGATACTATTCAAGAAGGAATGGTGCTAAGTGCGTATGTAAAAAGCATTGAGGATCATGGTTTTATGCTTCATTTTGGATTACCTTCCTTTGCTGGATTTATGCAGAAACAAAAGCAATCTGATAGCAGAAACCTTGAAATAAGCATTGGCCAGCTTTTACAAGGGGTTGTTAAAAGTGTAGACAGAGCTCGGAAGGTTGTCCATTTGAGTTCTGATGCTGACGTGGTTTCAAAATGTGTGATCAAAGTCCTTAAGGGTATTTCAATCGATCTTCTCGTTCCAGGCATGATGGTTAATGCTCGTGTGCAGGCAACCCTTGAAAATGGCATCATGTTATCTTTCCTTTCATATTTTACTGGAACTGTTGACATTTTTAATCTAGACAAAACTTTTCCCCCTTCAAACTGGAAGAATGATTACACAAAAAATCTGAAGTTTAATGCGCGGATCTTGTTTATTGATCCTTCAACTAGGGCTGTTGGACTAACACTGAATCCTTACCTAGTCAGTAATAAGGCTCCATTGTCTATTGTTAAAATTGGGGACATCTTTGATCAGTCTAAAGTAGTCAGGGTTGATAAGGGATCAGGCCTTCTTCTGGAACTTCCTACTCTACCAGTCCCAACCCCAGCTTATGTCAATTTAGCTGATGTGGCTGACAAAGAAGTTGGAAAACTGGAGAAGAGTTTCAAGGAAGGGAGCCTTGTTCGTGTCAGGGTACTTGGGTACAGGCACTTGGAAGGGCTCGCAACTGGTGTTTTAAAGACTAGTGCGTTTGAAGGCTTAGTTTTTACTCACTCTGACGTAAAGCCGGGAATGGTGGTAAAAGCTAAAGTCATTGCAGTTGACAGCTTTGGGGCTATTGTGCAGTTTGCTAGTGGTGTGAAAGCCCTATGTCCTCTCCGTCATATGTCAGAATTTGAAATAGCGAAGCCTAGGAAAAAGTTTCAGGTTGGAGTTGAGTTAGTATTCCGTGTTCTTGGCTGCAAATCCAAGAGAATCACCGTGACACACAAGAAAACTCTTGTTAAGTCAAAGCTGGAGATTCTTAGTTCTTATGCTGATGCCACTGATGGGTTAATCACTCATGGGTGGATTACAAAGATTGAGAAACATGGATGCTTTGTTCGGTTCTACAATGGGGTTCAAGGATTTGCCCCGAGATCTGAACTTGGTTTGGGACCAGGTAGTGACATAGGTTCCATGTATCATGTTGAACAAGTTGTCAAGTGTAGAGTTTTTAAATGTATTCCTGCTTCGCACCGGATATACCTGAGTTTCAACATGACACCTACAAGGATGTCAGAGGATGAGAGACTCAAACCAGGCAGCCTAGTCTCTGGAATTGTTGAGCGTGTAACACCTCAGGCAGTGGTGGTGGACGTCAATGCCTCCAGTCACATGAAAGGCACAATCTCTCTTGAACACTTGGCTGACCACCATGGTCTTGCTGCTTCACTGATATCTGCCATCAAGCTGGGATATCACTTTGATCAACTATTGGTTCTTGATGTTGAGGGAAACAATCTTGTGCTTACTGCCAAGTATTCATTAGTTAACTCAAGCCAACAGCTTCCTTATGATGTTAGCCAAATCCATTCTCACTCTGTAGTGCATGGTTACATATGTAATATAATTGAAAGTGGCTGCTTTGTTCGATTTCTTGGTCGTTTAACTGGTTTTGCTCCCAAAAGCAAGGCTATTGATGATAGAAGATCAGATCTTTCAGAGGTCTTTTATGTTGGGCAGTCTGTTCGCAGCAACATACTTGATGTTAGTAGTGACATGCGTAGAATAACACTATCTTTGAAGCAGTCATTGTGCTGTTCAACTGATGCATCTTTTATCCAAGAATACTTTCTTTTGGAAGAGAAGATTGCAAAGCTGCAAGCATTGGACTCTGAAGACCCTGGATTGAGATGGGTTGATGGATTTGGCATTTGCAGTATTGTTGAAGGAAAAGTACATGAAATTAAGGATTTTGGTGTTGCTGTCAGCTTTGAGAAATACAATGATGTGTATGGCTTCATCTCACATTGTCAGTTGGCTGAAACCACCTTGGAGAACAATTCTGTTATCAGAGCTGCAGTTCTTGATGTTGTTTCGCTTCCAACCTATAACTTTACCATAGGCTATGCGTCATTAGCTGATTACAACACTCAGAAATTACCTCCTAAACATTTTACCAATGGACAAAGTGTCTCTGCCACCGTGATGGCTCTTCCAGGTCCTGCAACGGGTGGGAGATTGCTGTTACTGCTCAAATCATTAAGCGATGGTTTGGAGACATCGAGTTCTAAGCGGGCAAAGAGGAAGTCTGGCTATGATGTTGGATCTCTCATTGAAGCAGAGATTACTGAAATAAAGCCTCTTGAACTGAGAGTGAAATTTGGTTCTGGATTCCATGGGAGGATTCATGTCACTGAGGCAACTGATGATAATTCTGTTGAAAGTCCCTTTAGTAACTACAGAATTGGGCAAACACTTACAGCGAGGATTGTTTCAAAGGGTAACAAGCCAGAAAATGTTAGAGGAATTTATGGATGGGAATTATCTATCAAACCTTCCCTTCTTAGAGGATCGAATGAGATACATGAAAGGGTATCTTCTGAAGAGTTCAACTATTCATATGGACAACAGGTTTCCGGGTTTGTGTATGAGATTGACTCTGACTGGGCCTGGCTGACTGTATCGCGAAATGTGAAGGCTCGGTTGTATGTTCTCGACTCTTCATGTGAGCCCTCTGAACTTACAGAATTCCAGAAGCGGTTTTATGTTGGCAAAGCTCTTTCAGGTTACATAATTAGTGCGAATAAGGAGAAGAAGTTACTACGTCTGGTCTTGCATGAACTAGCTGTTGGTGTTGCGGAACTCAGTGAAAATCATCCTGACCATCGTTTATGCCATCTAGCCGAAGGTAGTCTTGTAGGTGGCAGGATTTCTAAGATTCTTCCAGGTGTTGGTGGGTTGCTGGTACTAGTGGATCAGCATCATTATGGGAAGGTTCATTTTACTGAAATAACAAACTCATGGGTCTCCAACCCACTTTCTGGTTATCACGAAGGACAGTTCGTTAAATGTAAAGTTCTGGAAATTGATCGTGCTGTTAAGGGCACAGTCCATGTTGACTTATCACTGCGATCAGCTCCAGATGCTTCACGTGACATGAGATCCACTGAGCTTAATGCTGGCATCTTAACTGCTTACAACAGCGACTTGATTATGATCAAGGTTGCTAGTCGACATAATTGTGGCTATGTAAAAAATGTTTCCTCGAGAGGATGTTTCATTTTGCTTTCTAGGAAGATAGATGCCAAAATTCTTCTTTCTAATTTGTCGGATAATTTTGTTGAAAATCCAGAAAAAGAGTTCCCTGTTGGGAAACTCGTCACTGGCAAGGTGCTATCGGTGGAACCATTGTCTAAGCGGGTTGAAGTTATTCTTAAGACTTCAGGTGAAAGCAGTGCACCAAAGTCTGAAACTAATCCCTTAAACCATATTACTGTCGGAGATGTTGTTTCTGGAAGAATTAAGCGCATCGAGTCTTATGGCTTGTTTATATCCATTGTTCACACAAATGTTGTGGGCTTGTGCCATGTTTCAGAGCTTGCTGATGATCGTGTAGATGACCTGGAGACAAAGTTTAAAACCGGAGAGAAAGTGACAGTCAAAGTTTTGAAGGTGGATAAAGACAGAAATCGAGTTTCTCTTGGGATGAAGAGTTCCTATTTCAATGATGAGGAAGTATCACCGACACCTCCCAGACAAAGCCATGATATTGCCATTGGCACCAATGATCCTGTCAAATTAGCCGAGCCAACAATTGAAAACACAAGTAATGAATGCGACAGTGGTCATGATCTTATACTAGCAGATGCTGAATCTAGAGCTCTCGTGCCACCCCTCGAGGTTCCCCTAGATGACATAGAAAGCTTAGATATTGAAGGTGGTGCTGGTCAATGTGAAGTAAATGTTACAACTGGGGATACCATTGAAGGGAAAGACCAAAGGAGGGCTAAAAAGAAAGCTAGGGAAGAGAGGGAACGAGAGATAAGGGCTGCTGAGGAGAGGCTGCTGGAGAAAGACATCCCAAGGAATGCTGATGAATTTGAGAAACTTATTCGAAGTTCCCCAAATAGCAGCTTCATATGGATAAAGTACATGGCTTTTATGCTCTCTATGGCTGATATTGAGAAGGCACGATCCATTGCAGAAAGGGCTTTGAGAACAATAAATATTCGAGAAGAGTCTGAGAAGCTGAATATCTGGGTTGCTTATTTCAACTTGGAAAATGAGTATGGCAATCCCCCTGAGGAGGCTGTTACAAAAATATTTCAAAGAGCATTGCAGTATTGTGATCCTAAAAAGGTGCATCTTGCCCTTCTGGGAATGTACGAAAGAACGGAGCAACATAAATTGGCTGATGAGCTTCTCGACAAAATGACTAGAAAGTTCAAGCATTCGTGCCAGGTCTGGTTGAGAAAAATCCAGTCTCTTTTGAAACGAAACAATGATGGAATTCAGTCGGTTGTAAATCGTGCCCTTCTGAGCCTTCCTCGACATAAGCATATAAAATTTATTTCACAGACTGCCATCCTTGAGTTCAAGTGTGGAATTCCAGATAGGGGAAGATCAATGTTTGAGGGAATGCTGAGGGAGTATCCGAAGAGGACAGATTTGTGGAGCGTCTATCTGGATCAAGAGATCCGGCTTGGCGATGCGGATTTGATTCGTGCATTATTTGAGAGAGCAATAAGCCTGAGCCTTCCCCCAAAAAAGATGAAGTTCTTGTTTAAGAAGTACCTCGAGTACGAAAAGTCCATTGGTGATGAAGAACGAATTGAGTCCGTGAAGAAGAAGGCATTGGAATATGTTGAGAATACCCTTGCTTGA

Protein:   MAPPSKKSKSKPNLKYLQRSPTKRAKSKESHPYGAVSSLKLPLQVEDDVPDFPRGGRSLLSREERNEVMAVADKGFEADQRVLKKRKKEKRVQNRNQSAEDDLGSLFGDGTMGKLPRFANKITLTNVSSGMKLWGVIAEVNEKDIVVSLPGGLRGLVRACDAFDPILDDEVKGDVESRYLSRIYHVGQLVSCVVLQVDDDRKEIAKRKIWLSLRLSLLHKSLTLDTIQEGMVLSAYVKSIEDHGFMLHFGLPSFAGFMQKQKQSDSRNLEISIGQLLQGVVKSVDRARKVVHLSSDADVVSKCVIKVLKGISIDLLVPGMMVNARVQATLENGIMLSFLSYFTGTVDIFNLDKTFPPSNWKNDYTKNLKFNARILFIDPSTRAVGLTLNPYLVSNKAPLSIVKIGDIFDQSKVVRVDKGSGLLLELPTLPVPTPAYVNLADVADKEVGKLEKSFKEGSLVRVRVLGYRHLEGLATGVLKTSAFEGLVFTHSDVKPGMVVKAKVIAVDSFGAIVQFASGVKALCPLRHMSEFEIAKPRKKFQVGVELVFRVLGCKSKRITVTHKKTLVKSKLEILSSYADATDGLITHGWITKIEKHGCFVRFYNGVQGFAPRSELGLGPGSDIGSMYHVEQVVKCRVFKCIPASHRIYLSFNMTPTRMSEDERLKPGSLVSGIVERVTPQAVVVDVNASSHMKGTISLEHLADHHGLAASLISAIKLGYHFDQLLVLDVEGNNLVLTAKYSLVNSSQQLPYDVSQIHSHSVVHGYICNIIESGCFVRFLGRLTGFAPKSKAIDDRRSDLSEVFYVGQSVRSNILDVSSDMRRITLSLKQSLCCSTDASFIQEYFLLEEKIAKLQALDSEDPGLRWVDGFGICSIVEGKVHEIKDFGVAVSFEKYNDVYGFISHCQLAETTLENNSVIRAAVLDVVSLPTYNFTIGYASLADYNTQKLPPKHFTNGQSVSATVMALPGPATGGRLLLLLKSLSDGLETSSSKRAKRKSGYDVGSLIEAEITEIKPLELRVKFGSGFHGRIHVTEATDDNSVESPFSNYRIGQTLTARIVSKGNKPENVRGIYGWELSIKPSLLRGSNEIHERVSSEEFNYSYGQQVSGFVYEIDSDWAWLTVSRNVKARLYVLDSSCEPSELTEFQKRFYVGKALSGYIISANKEKKLLRLVLHELAVGVAELSENHPDHRLCHLAEGSLVGGRISKILPGVGGLLVLVDQHHYGKVHFTEITNSWVSNPLSGYHEGQFVKCKVLEIDRAVKGTVHVDLSLRSAPDASRDMRSTELNAGILTAYNSDLIMIKVASRHNCGYVKNVSSRGCFILLSRKIDAKILLSNLSDNFVENPEKEFPVGKLVTGKVLSVEPLSKRVEVILKTSGESSAPKSETNPLNHITVGDVVSGRIKRIESYGLFISIVHTNVVGLCHVSELADDRVDDLETKFKTGEKVTVKVLKVDKDRNRVSLGMKSSYFNDEEVSPTPPRQSHDIAIGTNDPVKLAEPTIENTSNECDSGHDLILADAESRALVPPLEVPLDDIESLDIEGGAGQCEVNVTTGDTIEGKDQRRAKKKAREEREREIRAAEERLLEKDIPRNADEFEKLIRSSPNSSFIWIKYMAFMLSMADIEKARSIAERALRTINIREESEKLNIWVAYFNLENEYGNPPEEAVTKIFQRALQYCDPKKVHLALLGMYERTEQHKLADELLDKMTRKFKHSCQVWLRKIQSLLKRNNDGIQSVVNRALLSLPRHKHIKFISQTAILEFKCGIPDRGRSMFEGMLREYPKRTDLWSVYLDQEIRLGDADLIRALFERAISLSLPPKKMKFLFKKYLEYEKSIGDEERIESVKKKALEYVENTLA